- cgiUniprotEntry.pl - cgi scripts to grep a uniprot AC and print a fasta with derivated sequence
- fasta-decoy.pl - decoy input databanks following several moethods
- fasta-shuffle-notryptic.pl - shuffle each sequence, without any original tryptic peptide
- ncbinr2phenyxfasta.pl - tranfoorm ncbirn bank into fasta with annotated headers
- uniprotdat2fasta.pl - converts uniprot native text format (.dat or .seq) into fasta file, reporting varsplic, signal, peptide, PTM, conflicts....