<s>
SMS	B-Application
(	O
Surface-water	B-Application
Modeling	I-Application
System	I-Application
)	O
is	O
a	O
complete	O
program	O
for	O
building	O
and	O
simulating	O
surface	O
water	O
models	B-Application
from	O
Aquaveo	O
.	O
</s>
<s>
Currently	O
supported	O
models	B-Application
include	O
ADCIRC	B-Application
,	O
CMS-FLOW2D	O
,	O
FESWMS	O
,	O
TABS	O
,	O
TUFLOW	O
,	O
BOUSS-2D	O
,	O
CGWAVE	B-Application
,	O
STWAVE	O
,	O
CMS-WAVE	O
(	O
WABED	O
)	O
,	O
GENESIS	O
,	O
PTM	O
,	O
and	O
WAM	O
.	O
</s>
<s>
Version	O
9.2	O
introduced	O
the	O
use	O
of	O
XMDF	B-Language
(	O
eXtensible	O
Model	O
Data	O
Format	O
)	O
,	O
which	O
is	O
a	O
compatible	O
extension	O
of	O
HDF5	B-Application
.	O
</s>
<s>
XMDF	B-Language
files	O
are	O
smaller	O
and	O
allow	O
faster	O
access	O
times	O
than	O
ASCII	B-Protocol
files	I-Protocol
.	O
</s>
<s>
SMS	B-Application
was	O
initially	O
developed	O
by	O
the	O
Engineering	O
Computer	O
Graphics	O
Laboratory	O
at	O
Brigham	O
Young	O
University	O
(	O
later	O
renamed	O
in	O
September	O
,	O
1998	O
to	O
Environmental	O
Modeling	O
Research	O
Laboratory	O
or	O
EMRL	O
)	O
in	O
the	O
late	O
1980s	O
on	O
Unix	B-Application
workstations	O
.	O
</s>
<s>
The	O
development	O
of	O
SMS	B-Application
was	O
funded	O
primarily	O
by	O
The	O
United	O
States	O
Army	O
Corps	O
of	O
Engineers	O
and	O
is	O
still	O
known	O
as	O
the	O
Department	O
of	O
Defense	O
Surface-water	B-Application
Modeling	I-Application
System	I-Application
or	O
DoD	O
SMS	B-Application
.	O
</s>
<s>
It	O
was	O
later	O
ported	O
to	O
Windows	B-Application
platforms	O
in	O
the	O
mid	O
1990s	O
and	O
support	O
for	O
HP-UX	B-Application
,	O
IRIX	B-Operating_System
,	O
OSF/1	B-Operating_System
,	O
and	O
Solaris	B-Application
platforms	O
was	O
discontinued	O
.	O
</s>
<s>
In	O
April	O
2007	O
,	O
the	O
main	O
software	O
development	O
team	O
at	O
EMRL	O
entered	O
private	O
enterprise	O
as	O
Aquaveo	O
LLC	O
,	O
and	O
continue	O
to	O
develop	O
SMS	B-Application
and	O
other	O
software	O
products	O
,	O
such	O
as	O
WMS	B-Application
(	O
Watershed	B-Application
Modeling	I-Application
System	I-Application
)	O
and	O
GMS	B-Application
(	O
Groundwater	B-Application
Modeling	I-Application
System	I-Application
)	O
.	O
</s>
<s>
SMS	B-Application
modeling	O
was	O
used	O
to	O
"	O
determine	O
flooded	O
areas	O
in	O
case	O
of	O
failure	O
or	O
revision	O
of	O
a	O
weir	O
in	O
combination	O
with	O
a	O
coincidental	O
100-year	O
flood	O
event	O
"	O
(	O
Gerstner	O
,	O
Belzner	O
,	O
and	O
Thorenz	O
,	O
p	O
.	O
975	O
)	O
.	O
</s>
<s>
Furthermore	O
,	O
"	O
concerning	O
the	O
water	O
level	O
calculations	O
in	O
case	O
of	O
failure	O
of	O
a	O
weir	O
,	O
the	O
Bavarian	O
Environmental	O
Agency	O
provided	O
the	O
Federal	O
Waterways	O
Engineering	O
and	O
Research	O
Institute	O
with	O
those	O
two-dimensional	O
depth-averaged	O
hydrodynamic	O
models	B-Application
,	O
which	O
are	O
covering	O
the	O
whole	O
Bavarian	O
part	O
of	O
the	O
river	O
Main	O
.	O
</s>
<s>
The	O
models	B-Application
were	O
created	O
with	O
the	O
software	O
Surface-Modeling	O
System	O
(	O
SMS	B-Application
)	O
of	O
Aquaveo	O
LLC	O
"	O
(	O
Gerstner	O
,	O
Belzner	O
,	O
and	O
Thorenz	O
,	O
976	O
)	O
.	O
</s>
<s>
This	O
article	O
"	O
describes	O
the	O
mathematical	O
formulation	O
,	O
numerical	O
implementation	O
,	O
and	O
input	O
specifications	O
of	O
rubble	O
mound	O
structures	O
in	O
the	O
Coastal	O
Modeling	O
System	O
(	O
CMS	O
)	O
operated	O
through	O
the	O
Surface-water	B-Application
Modeling	I-Application
System	I-Application
(	O
SMS	B-Application
)	O
”	O
(	O
Li	O
et	O
al.	O
,	O
1	O
)	O
.	O
</s>
<s>
Describing	O
the	O
input	O
specifications	O
,	O
the	O
authors	O
write	O
,	O
"	O
Working	O
with	O
the	O
SMS	B-Application
interface	O
,	O
users	O
can	O
specify	O
rubble	O
mound	O
structures	O
in	O
the	O
CMS	O
by	O
creating	O
datasets	O
for	O
different	O
structure	O
parameters	O
.	O
</s>
<s>
Five	O
datasets	O
are	O
required	O
for	O
this	O
application	O
"	O
(	O
Li	O
et	O
al.	O
,	O
p	O
.	O
3	O
)	O
and	O
"	O
users	O
should	O
refer	O
to	O
Aquaveo	O
(	O
2010	O
)	O
for	O
generating	O
a	O
XMDF	B-Language
dataset	O
( *	O
.h5	B-Application
file	O
)	O
under	O
the	O
SMS	B-Application
"	O
(	O
Li	O
et	O
al.	O
,	O
p	O
.	O
5	O
)	O
.	O
</s>
<s>
This	O
study	O
examined	O
the	O
"	O
need	O
of	O
developing	O
mathematical	O
models	B-Application
for	O
determining	O
and	O
predicting	O
water	O
quality	O
of	O
'	O
river-type	O
'	O
systems	O
.	O
</s>
<s>
"	O
The	O
obtained	O
numerical	B-Application
models	I-Application
were	O
developed	O
using	O
the	O
program	O
Surface-water	B-Application
Modeling	I-Application
System	I-Application
(	O
SMS	B-Application
)	O
v.10.1.11	O
,	O
which	O
was	O
designed	O
by	O
experts	O
from	O
Aquaveo	O
company	O
.	O
</s>
<s>
The	O
hydrodynamics	O
of	O
the	O
studied	O
sector	O
,	O
obtained	O
using	O
the	O
SMS	B-Application
module	O
named	O
RMA2	O
[13],	O
served	O
as	O
input	O
for	O
the	O
RMA	O
module	O
4	O
,	O
which	O
determined	O
the	O
pollutant	O
dispersion	O
"	O
(	O
Marusic	O
and	O
Ciufudean	O
,	O
p	O
.	O
178	O
–	O
179	O
)	O
.	O
</s>
<s>
"	O
A	O
two-dimensional	O
(	O
in	O
a	O
horizontal	O
plane	O
)	O
model	O
for	O
the	O
examined	O
region	O
of	O
the	O
water	O
storage	O
basin	O
was	O
constructed	O
by	O
making	O
use	O
of	O
the	O
software	O
product	O
SMS	B-Application
v.10	O
of	O
the	O
American	O
company	O
AQUAVEO	O
LLC	O
"	O
(	O
Lyubimova	O
et	O
al.	O
,	O
p	O
.	O
2	O
)	O
.	O
</s>
<s>
Evaluations	O
of	O
the	O
SMS-derived	O
,	O
two-dimensional	O
model	O
as	O
well	O
as	O
a	O
three-dimensional	O
model	O
yielded	O
the	O
discovery	O
that	O
"	O
the	O
selective	O
water	O
intake	O
from	O
the	O
near-surface	O
layers	O
can	O
essentially	O
reduce	O
hardness	O
of	O
potable	O
water	O
consumed	O
by	O
the	O
inhabitants	O
of	O
Perm	O
"	O
(	O
Lyubimova	O
et	O
al.	O
,	O
p	O
.	O
6	O
)	O
.	O
</s>
