[BioC] custom affylmGUI menus
Stefanie De Bodt
stefanie.debodt at psb.ugent.be
Wed Nov 28 12:03:51 CET 2007
I would like to use vsn normalization through the affylmGUI package. Is
this possible by customizing the menu?
I followed the guidelines in the documentation of the affylmGUI package.
I have changed the affylmGUI-menus.txt file in the etc folder.
item normalizeMenu command "vsn" vsn
I have also copied the vsn.R source file to the etc folder. Is this
necessary or should more source files/the complete package be copied to
I get the following error:
Error in eval(expr,envir,enclos): object "vsn" not found
Thanks for any suggestions,
Stefanie De Bodt, PhD
VIB Department of Plant Systems Biology, UGent
Bioinformatics and Evolutionary Genomics
Tel: 32 (0)9 3313692
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